Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015917999.1_cds_XP_016467529.1_60267
CDS Infomation

[gene=LOC107790138] [db_xref=GeneID:107790138] [protein=AAA-ATPase At3g28510-like] [protein_id=XP_016467529.1] [location=68086..69585] [gbkey=CDS]
Sequence

ATGGGAGCAATATCATTGACTGAATTAGGCTCTAAGCTTGCTGGATTGATGTTCATTTGG
GGCACAATCCAGCAATTCTTCCCCTATACACTCCGCAAACGCATCAAATACTTTTGGCAG
AAATTGGAAAATTACTTCTACCCTTATGTTCAAATTACTATTGATGAATTCACCAATGGT
AAAAGCAACGATATATACACCCAGGTCAACTCTTATTTGGGTACTAAGTCAATCAACAAA
GATGCTAAATATCTCAAAGCTGAAAAGTCCAAGAATAGTAAGTCTGTTGCTGTTAGCTTA
GACGAAGGAGAAGAGATTACTGATCAATTCCTAGGAGCTAAACTCTCTTGGCGCTCTCAT
ATCGAAACATTCAATGAAAATTCTTCAGGACGTAAAAATTCACGTCCAATTGAAAAGAAA
AGTTACACTATAACTTTCAATCAACGATATAAAGAAATGGTCATTGGAAAATACTTGAAG
CATGTGATGGAAGAAGGTAAGGTTATTGAGTTTAAAAACAGGAAACAAAAGATTTACTCC
AACAATTGTAGTGAGGATTGGTATTGGTATGAAAAAGGTATGTGGAGGGACATTAACTTT
GAGCATCCTGCAACTTTTGATACTTTGGCTATGGACCCTAAGAAGAAGAAGGAAATAGTC
ATCGATCTCATTGCTTTTAGCAAAGGAAAGGACTATTATTCTAAGGTTGGTAAAGCTTGG
AAGCGCGGCTATCTTCTTTATGGTCCGCCAGGGACAGGAAAATCAACTATGATTGCAGCT
ATTGCGAACTTCTTGAATTATGATATTTATGATCTTGAGCTCACTTCTGTTAAGGACAAC
TCAGGGCTTAAGAAGTTGCTTATGGAAACAACAAGCAAGTCTATTATTGTAATTGAAGAT
ATTGATTGCTCTATTGATCTCACAGGCAAGAGAAAGAAGAAGAAAAAGAAGAGCGAGGAA
ACAGTAAACGAAGATCAGGAAGATGACTCAGACTCGTCTAAAGAAAAAGCAAGTGAAAAT
AAGGAAACTGGCAAACTTACACTTTCAGGACTGTTGAATTTCATTGATGGAATATGGTCA
GCTTGTGGTCAAGAGAGGATAATCATATTTACAACCAATCATAAGGATAAACTTGATCCA
GCTCTCATACGTAGAGGACGGATGGATATGCACATTGAGATGTCATATTGCAAATATGAA
GCATTTAAAGTGTTGGCTAAGAATTATTTGGATATTGAAACACACCCTCTGTTTCAACAG
ATTCAAGGTTTATTCGAGGAAGTAAACATTAGTCCTTGTGATGTGGCTGAGAATTTAATG
CTGAAAAATGTTTCTGAAGGGCCTGAGATTTGCTTGAATAACTTAATTCAAGCTCTGGAA
AAGGCCAAGGAAAAGGCCAGTAAAGATAAAGAAGCTAAGGAAAAAGCCAGCTTGAATTCC
AAGAACATCAAAAAGTTTTCCACAAAATTGGTTGGTCGTCTAAAAACGTTGTGGAAATGA

Peptide Sequence

PEP ID

XP_016467529.1
PEP Infomation

PREDICTED: AAA-ATPase At3g28510-like [Nicotiana tabacum]
Sequence

MGAISLTELGSKLAGLMFIWGTIQQFFPYTLRKRIKYFWQKLENYFYPYVQITIDEFTNG
KSNDIYTQVNSYLGTKSINKDAKYLKAEKSKNSKSVAVSLDEGEEITDQFLGAKLSWRSH
IETFNENSSGRKNSRPIEKKSYTITFNQRYKEMVIGKYLKHVMEEGKVIEFKNRKQKIYS
NNCSEDWYWYEKGMWRDINFEHPATFDTLAMDPKKKKEIVIDLIAFSKGKDYYSKVGKAW
KRGYLLYGPPGTGKSTMIAAIANFLNYDIYDLELTSVKDNSGLKKLLMETTSKSIIVIED
IDCSIDLTGKRKKKKKKSEETVNEDQEDDSDSSKEKASENKETGKLTLSGLLNFIDGIWS
ACGQERIIIFTTNHKDKLDPALIRRGRMDMHIEMSYCKYEAFKVLAKNYLDIETHPLFQQ
IQGLFEEVNISPCDVAENLMLKNVSEGPEICLNNLIQALEKAKEKASKDKEAKEKASLNS
KNIKKFSTKLVGRLKTLWK

Transcript Sequence

Gene sequence data has not been registered.